Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00383900 | CKAN_01283100 | A0A3S3PXQ5 | A0A443NZT0 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase isoform X1; Belongs to the aldehyde dehydrogenase family. | Uncharacterized protein. | 0.425 |
CKAN_00383900 | CKAN_02391500 | A0A3S3PXQ5 | A0A3S3P6K4 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase isoform X1; Belongs to the aldehyde dehydrogenase family. | Fumarate lyase. | 0.812 |
CKAN_00601400 | CKAN_01283100 | A0A3S3Q2N6 | A0A443NZT0 | Aldehyde dehydrogenase family 2 member C4; Belongs to the aldehyde dehydrogenase family. | Uncharacterized protein. | 0.425 |
CKAN_00601400 | CKAN_02391500 | A0A3S3Q2N6 | A0A3S3P6K4 | Aldehyde dehydrogenase family 2 member C4; Belongs to the aldehyde dehydrogenase family. | Fumarate lyase. | 0.812 |
CKAN_00707200 | CKAN_01283100 | A0A3S3MLB9 | A0A443NZT0 | Localized to the inner membrane of the chloroplast. | Uncharacterized protein. | 0.516 |
CKAN_01283100 | CKAN_00383900 | A0A443NZT0 | A0A3S3PXQ5 | Uncharacterized protein. | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase isoform X1; Belongs to the aldehyde dehydrogenase family. | 0.425 |
CKAN_01283100 | CKAN_00601400 | A0A443NZT0 | A0A3S3Q2N6 | Uncharacterized protein. | Aldehyde dehydrogenase family 2 member C4; Belongs to the aldehyde dehydrogenase family. | 0.425 |
CKAN_01283100 | CKAN_00707200 | A0A443NZT0 | A0A3S3MLB9 | Uncharacterized protein. | Localized to the inner membrane of the chloroplast. | 0.516 |
CKAN_01283100 | CKAN_01401100 | A0A443NZT0 | A0A3S4P3G5 | Uncharacterized protein. | Aldehyde dehydrogenase family 2 member B7, mitochondrial; Belongs to the aldehyde dehydrogenase family. | 0.425 |
CKAN_01283100 | CKAN_01956400 | A0A443NZT0 | A0A3S3MV95 | Uncharacterized protein. | Uncharacterized protein. | 0.462 |
CKAN_01283100 | CKAN_01965000 | A0A443NZT0 | A0A3S3NMC7 | Uncharacterized protein. | Localized to the inner membrane of the chloroplast. | 0.518 |
CKAN_01283100 | CKAN_02015100 | A0A443NZT0 | A0A3S3MW33 | Uncharacterized protein. | Betaine aldehyde dehydrogenase 1, chloroplastic; Belongs to the aldehyde dehydrogenase family. | 0.425 |
CKAN_01283100 | CKAN_02215600 | A0A443NZT0 | A0A3S3PKW2 | Uncharacterized protein. | Localized to the inner membrane of the chloroplast. | 0.511 |
CKAN_01283100 | CKAN_02391500 | A0A443NZT0 | A0A3S3P6K4 | Uncharacterized protein. | Fumarate lyase. | 0.488 |
CKAN_01283100 | CKAN_02484100 | A0A443NZT0 | A0A443PXK1 | Uncharacterized protein. | Protein SLOW GREEN 1, chloroplastic. | 0.427 |
CKAN_01401100 | CKAN_01283100 | A0A3S4P3G5 | A0A443NZT0 | Aldehyde dehydrogenase family 2 member B7, mitochondrial; Belongs to the aldehyde dehydrogenase family. | Uncharacterized protein. | 0.425 |
CKAN_01401100 | CKAN_02391500 | A0A3S4P3G5 | A0A3S3P6K4 | Aldehyde dehydrogenase family 2 member B7, mitochondrial; Belongs to the aldehyde dehydrogenase family. | Fumarate lyase. | 0.812 |
CKAN_01956400 | CKAN_01283100 | A0A3S3MV95 | A0A443NZT0 | Uncharacterized protein. | Uncharacterized protein. | 0.462 |
CKAN_01965000 | CKAN_01283100 | A0A3S3NMC7 | A0A443NZT0 | Localized to the inner membrane of the chloroplast. | Uncharacterized protein. | 0.518 |
CKAN_02015100 | CKAN_01283100 | A0A3S3MW33 | A0A443NZT0 | Betaine aldehyde dehydrogenase 1, chloroplastic; Belongs to the aldehyde dehydrogenase family. | Uncharacterized protein. | 0.425 |
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