STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_0128970014-3-3-like protein GF14 kappa; Belongs to the 14-3-3 family. (251 aa)    
Predicted Functional Partners:
CKAN_00046700
Dual specificity phosphatase Cdc25.
    
 0.893
CKAN_00873200
E3 ubiquitin-protein ligase UPL5-like protein isoform X1.
    
 0.872
CKAN_00486700
NHL repeat-containing protein 2 isoform X1.
    
 0.808
CKAN_02572300
Bifunctional riboflavin kinase/FMN phosphatase-like protein.
 
  
  0.790
CKAN_00909200
HAD hydrolase.
 
  
  0.790
CKAN_02580600
Prohibitin.
    
 0.694
CKAN_01271500
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 
 0.676
CKAN_02610000
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 
 0.676
CKAN_02263700
Protein phosphatase 2A.
  
 0.655
CKAN_00585500
Choline/Ethanolamine kinase.
   
 0.642
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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