STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
CKAN_01296800Alternative NADPH-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X2. (542 aa)    
Predicted Functional Partners:
CKAN_01287700
2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic isoform X1.
     
 0.921
CKAN_00219700
2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic-like protein.
     
 0.912
CKAN_00220500
UbiE/COQ5 methyltransferase.
     
 0.912
CKAN_02627700
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
  0.837
CKAN_02545500
NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9, mitochondrial.
  
 
 0.719
CKAN_00492400
Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family.
    
 0.707
CKAN_02351000
Putative polygalacturonase.
    
 0.707
CKAN_02507800
4Fe-4S binding domain-containing protein.
  
 
 0.696
CKAN_00972600
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
   0.690
CKAN_01616300
NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 2.
    
   0.687
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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