STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01350400Alcohol dehydrogenase. (423 aa)    
Predicted Functional Partners:
CKAN_00843400
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.958
CKAN_00822700
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.820
CKAN_01048900
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.820
CKAN_01474600
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.820
CKAN_00414400
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.820
CKAN_02197100
Aldehyde dehydrogenase NADP-dependent; Belongs to the aldehyde dehydrogenase family.
  
 0.818
CKAN_02523600
Aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.776
CKAN_00735600
Putative aldehyde dehydrogenase.
  
 0.748
CKAN_01474700
Aldehyde dehydrogenase family 3 member F1-like protein.
  
 0.735
CKAN_02358200
Aldehyde dehydrogenase 22A1; Belongs to the aldehyde dehydrogenase family.
  
 0.735
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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