STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01345200Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (848 aa)    
Predicted Functional Partners:
CKAN_01469500
30-cleavage and polyadenylation specificity factor 30.
    
 0.979
CKAN_02632200
Mitotic spindle checkpoint protein MAD2.
   
 0.900
CKAN_02287500
TATA box binding protein associated factor TAF.
    
 0.895
CKAN_02438600
Transcription initiation factor TFIID subunit 4b isoform X2.
    
 0.893
CKAN_01825700
Anaphase-promoting complex subunit 6.
   
 0.891
CKAN_00338200
Transcription initiation factor TFIID subunit 2 isoform X1.
    
 0.889
CKAN_00432600
Ubiquitin domain-containing protein.
   
 0.887
CKAN_00369400
Anaphase-promoting complex subunit 4.
    
 0.884
CKAN_02031400
Testis-expressed sequence 10 protein isoform X2.
   
 0.881
CKAN_00740700
Anaphase-promoting complex subunit 1.
    
 0.878
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.