Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_01362100 | CKAN_01568100 | A0A443P1Y0 | A0A3S3QMK0 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | Frataxin, mitochondrial. | 0.958 |
CKAN_01362100 | CKAN_01802500 | A0A443P1Y0 | A0A3S4PDJ5 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | Cysteine desulfurase, mitochondrial. | 0.918 |
CKAN_01362100 | CKAN_01825400 | A0A443P1Y0 | A0A3S4PE30 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | Cysteine desulfurase, mitochondrial. | 0.918 |
CKAN_01362100 | CKAN_02144900 | A0A443P1Y0 | A0A3S3NHA6 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | Cysteine desulfurase 1, chloroplastic. | 0.918 |
CKAN_01362100 | CKAN_02336800 | A0A443P1Y0 | A0A443PTJ2 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.955 |
CKAN_01362100 | CKAN_02378500 | A0A443P1Y0 | A0A443PUQ4 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | L-cysteine desulfhydrase-like protein. | 0.918 |
CKAN_01362100 | CKAN_02722100 | A0A443P1Y0 | A0A3S3PBQ4 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.912 |
CKAN_01362100 | CKAN_02738200 | A0A443P1Y0 | A0A3S3PBZ6 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | Putative Photosystem II D2 protein. | 0.953 |
CKAN_01362100 | CKAN_02750400 | A0A443P1Y0 | A0A443Q4W9 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | Photosystem II protein I chloroplast. | 0.913 |
CKAN_01362100 | psbD | A0A443P1Y0 | A0A0U2F348 | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.953 |
CKAN_01568100 | CKAN_01362100 | A0A3S3QMK0 | A0A443P1Y0 | Frataxin, mitochondrial. | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | 0.958 |
CKAN_01568100 | CKAN_01802500 | A0A3S3QMK0 | A0A3S4PDJ5 | Frataxin, mitochondrial. | Cysteine desulfurase, mitochondrial. | 0.980 |
CKAN_01568100 | CKAN_01825400 | A0A3S3QMK0 | A0A3S4PE30 | Frataxin, mitochondrial. | Cysteine desulfurase, mitochondrial. | 0.980 |
CKAN_01568100 | CKAN_02144900 | A0A3S3QMK0 | A0A3S3NHA6 | Frataxin, mitochondrial. | Cysteine desulfurase 1, chloroplastic. | 0.978 |
CKAN_01568100 | CKAN_02336800 | A0A3S3QMK0 | A0A443PTJ2 | Frataxin, mitochondrial. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.999 |
CKAN_01568100 | CKAN_02378500 | A0A3S3QMK0 | A0A443PUQ4 | Frataxin, mitochondrial. | L-cysteine desulfhydrase-like protein. | 0.978 |
CKAN_01802500 | CKAN_01362100 | A0A3S4PDJ5 | A0A443P1Y0 | Cysteine desulfurase, mitochondrial. | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | 0.918 |
CKAN_01802500 | CKAN_01568100 | A0A3S4PDJ5 | A0A3S3QMK0 | Cysteine desulfurase, mitochondrial. | Frataxin, mitochondrial. | 0.980 |
CKAN_01802500 | CKAN_02144900 | A0A3S4PDJ5 | A0A3S3NHA6 | Cysteine desulfurase, mitochondrial. | Cysteine desulfurase 1, chloroplastic. | 0.506 |
CKAN_01802500 | CKAN_02336800 | A0A3S4PDJ5 | A0A443PTJ2 | Cysteine desulfurase, mitochondrial. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.998 |
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