STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01368400Disease resistance protein RPM1. (311 aa)    
Predicted Functional Partners:
CKAN_01633300
Plant intracellular Ras-group-related LRR protein 5-like protein.
  
     0.520
CKAN_01132300
Putative disease resistance protein.
  
 
   0.513
CKAN_00362300
Plant intracellular ras group-related LRR 6.
  
     0.510
CKAN_01137100
Plant intracellular Ras-group-related LRR protein 6.
  
     0.509
CKAN_01131900
Putative disease resistance protein.
  
 
   0.507
CKAN_00570600
Plant intracellular Ras-group-related LRR protein 7.
  
     0.504
CKAN_00001700
Putative disease resistance protein; Belongs to the disease resistance NB-LRR family.
  
 
   0.496
CKAN_02093100
Uncharacterized protein.
  
     0.494
CKAN_02315400
LRR receptor-like serine/threonine-protein kinase GSO1 isoform X2.
  
     0.436
CKAN_00747100
Ubiquitin domain-containing protein.
  
     0.432
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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