STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01454900Zinc transporter 8. (408 aa)    
Predicted Functional Partners:
CKAN_00747700
SAM50-like protein SPAC17C9.06.
    
 
 0.807
CKAN_01303500
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
    
 
 0.794
CKAN_00895600
Bacterial surface antigen D15.
    
 
 0.741
CKAN_00650700
Casein kinase II subunit alpha-2; Belongs to the protein kinase superfamily.
    
 0.649
CKAN_00649900
Casein kinase II subunit alpha-like protein; Belongs to the protein kinase superfamily.
    
 0.649
CKAN_01168000
Casein kinase II subunit alpha-like protein; Belongs to the protein kinase superfamily.
    
 0.649
CKAN_00322600
Mitochondrial import receptor subunit TOM40-1-like protein.
   
 
 0.547
CKAN_00812700
IAA-alanine resistance protein 1.
   
 0.426
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.