STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01466800Uncharacterized protein. (73 aa)    
Predicted Functional Partners:
CKAN_02544000
V-type proton ATPase subunit F.
  
 0.998
CKAN_02495700
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
  
 0.998
CKAN_00692400
V-type proton ATPase subunit D-like protein.
  
 0.998
CKAN_00593600
V-type proton ATPase subunit c; Belongs to the V-ATPase proteolipid subunit family.
  
 0.996
CKAN_00479600
V-type proton ATPase subunit E-like protein.
  
 0.989
CKAN_02589200
Uncharacterized protein.
  
 0.989
CKAN_00764000
Acid phosphatase 1.
  
 0.989
CKAN_00764200
Serotonin N-acetyltransferase 1, chloroplastic isoform X3.
  
 0.989
CKAN_02787900
V-type proton ATPase subunit B 1 isoform X1.
  
 0.987
CKAN_02758700
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
  
 0.987
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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