Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00022600 | CKAN_00777200 | A0A3S3M2E5 | A0A3S3MMR9 | Ribonuclease J isoform X1. | Protein ANTHESIS POMOTING FACTOR 1 isoform X2. | 0.971 |
CKAN_00022600 | CKAN_01469500 | A0A3S3M2E5 | A0A443P4Y7 | Ribonuclease J isoform X1. | 30-cleavage and polyadenylation specificity factor 30. | 0.999 |
CKAN_00022600 | CKAN_01520300 | A0A3S3M2E5 | A0A3S3MMF3 | Ribonuclease J isoform X1. | E3 ubiquitin-protein ligase RBBP6 isoform X2. | 0.954 |
CKAN_00022600 | CKAN_01801400 | A0A3S3M2E5 | A0A3S3NBK6 | Ribonuclease J isoform X1. | E3 ubiquitin-protein ligase RBBP6 isoform X1. | 0.954 |
CKAN_00022600 | CKAN_01928800 | A0A3S3M2E5 | A0A3S3NLU1 | Ribonuclease J isoform X1. | DNA cross-link repair protein SNM1. | 0.404 |
CKAN_00022600 | CKAN_02319000 | A0A3S3M2E5 | A0A3S3N1A0 | Ribonuclease J isoform X1. | DNA ligase. | 0.657 |
CKAN_00022600 | CKAN_02319100 | A0A3S3M2E5 | A0A3S3NTB7 | Ribonuclease J isoform X1. | DNA repair metallo-beta-lactamase. | 0.657 |
CKAN_00022600 | CKAN_02334900 | A0A3S3M2E5 | A0A3S3NFK0 | Ribonuclease J isoform X1. | WD40 repeat. | 0.971 |
CKAN_00022600 | CKAN_02359000 | A0A3S3M2E5 | A0A3S3NFW2 | Ribonuclease J isoform X1. | Pre-mRNA polyadenylation factor Fip1. | 0.950 |
CKAN_00734500 | CKAN_00777200 | A0A3S3M834 | A0A3S3MMR9 | Cleavage and polyadenylation specificity factor subunit 3-I. | Protein ANTHESIS POMOTING FACTOR 1 isoform X2. | 0.975 |
CKAN_00734500 | CKAN_01469500 | A0A3S3M834 | A0A443P4Y7 | Cleavage and polyadenylation specificity factor subunit 3-I. | 30-cleavage and polyadenylation specificity factor 30. | 0.999 |
CKAN_00734500 | CKAN_01520300 | A0A3S3M834 | A0A3S3MMF3 | Cleavage and polyadenylation specificity factor subunit 3-I. | E3 ubiquitin-protein ligase RBBP6 isoform X2. | 0.962 |
CKAN_00734500 | CKAN_01801400 | A0A3S3M834 | A0A3S3NBK6 | Cleavage and polyadenylation specificity factor subunit 3-I. | E3 ubiquitin-protein ligase RBBP6 isoform X1. | 0.973 |
CKAN_00734500 | CKAN_02319000 | A0A3S3M834 | A0A3S3N1A0 | Cleavage and polyadenylation specificity factor subunit 3-I. | DNA ligase. | 0.533 |
CKAN_00734500 | CKAN_02319100 | A0A3S3M834 | A0A3S3NTB7 | Cleavage and polyadenylation specificity factor subunit 3-I. | DNA repair metallo-beta-lactamase. | 0.533 |
CKAN_00734500 | CKAN_02334900 | A0A3S3M834 | A0A3S3NFK0 | Cleavage and polyadenylation specificity factor subunit 3-I. | WD40 repeat. | 0.975 |
CKAN_00734500 | CKAN_02359000 | A0A3S3M834 | A0A3S3NFW2 | Cleavage and polyadenylation specificity factor subunit 3-I. | Pre-mRNA polyadenylation factor Fip1. | 0.978 |
CKAN_00777200 | CKAN_00022600 | A0A3S3MMR9 | A0A3S3M2E5 | Protein ANTHESIS POMOTING FACTOR 1 isoform X2. | Ribonuclease J isoform X1. | 0.971 |
CKAN_00777200 | CKAN_00734500 | A0A3S3MMR9 | A0A3S3M834 | Protein ANTHESIS POMOTING FACTOR 1 isoform X2. | Cleavage and polyadenylation specificity factor subunit 3-I. | 0.975 |
CKAN_00777200 | CKAN_01469500 | A0A3S3MMR9 | A0A443P4Y7 | Protein ANTHESIS POMOTING FACTOR 1 isoform X2. | 30-cleavage and polyadenylation specificity factor 30. | 0.999 |
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