STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01480400Protein IQ-DOMAIN 32-like protein. (808 aa)    
Predicted Functional Partners:
CKAN_00764400
60S ribosomal protein L10-like protein.
   
 0.564
CKAN_02473500
Hsp70-binding protein 1.
   
 0.564
CKAN_00916800
Ribosomal_L16 domain-containing protein.
   
 0.564
CKAN_00268900
Hsp70 nucleotide exchange factor FES1 isoform X2.
   
 0.564
CKAN_02736400
Putative ribosomal protein L22/L17 plastid; Belongs to the universal ribosomal protein uL22 family.
   
 0.564
CKAN_02756400
Ribosomal protein L16 mitochondrion; Belongs to the universal ribosomal protein uL16 family.
   
 0.564
CKAN_02781100
Ribosomal protein L5 mitochondrion.
   
 
 0.511
CKAN_02657800
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.444
CKAN_01424700
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
  
 0.438
CKAN_01535800
30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.435
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.