STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01564100Transthyretin-like S-allantoin synthase protein. (326 aa)    
Predicted Functional Partners:
CKAN_01410600
Uricase-2 isozyme 2-like protein.
 
 
 0.971
CKAN_02124600
Amidohydrolase 1.
 
  
 0.945
CKAN_00314600
Dihydropyrimidinase.
    
 0.894
CKAN_00495500
Cyanidin 3-O-glucoside 7-O-glucosyltransferase acyl-glucose-like protein; Belongs to the glycosyl hydrolase 1 family.
   
 
  0.873
CKAN_02461900
Glycoside hydrolase.
   
 
  0.873
CKAN_02334500
Protein enabled.
     
 0.790
CKAN_00687100
Peroxisomal nicotinamide adenine dinucleotide carrier-like protein isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 
 0.761
CKAN_02301600
Mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 
 0.761
CKAN_02412100
Nicotinamide adenine dinucleotide transporter 1, chloroplastic-like protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 
 0.761
CKAN_00512400
Peroxisomal adenine nucleotide carrier 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 
 0.761
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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