Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00090500 | CKAN_00455400 | A0A3S3M3M9 | A0A3S3NVT7 | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | Pectate lyase. | 0.894 |
CKAN_00090500 | CKAN_00531600 | A0A3S3M3M9 | A0A443NEA2 | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | Pectate lyase. | 0.907 |
CKAN_00090500 | CKAN_00724100 | A0A3S3M3M9 | A0A443NJK4 | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | Pectate lyase. | 0.895 |
CKAN_00090500 | CKAN_00727000 | A0A3S3M3M9 | A0A3S3Q3L3 | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | Pectate lyase. | 0.895 |
CKAN_00090500 | CKAN_01216800 | A0A3S3M3M9 | A0A443NY03 | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | Pectate lyase. | 0.894 |
CKAN_00090500 | CKAN_01645500 | A0A3S3M3M9 | A0A443P9U3 | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | Pectinesterase. | 0.874 |
CKAN_00090500 | CKAN_02484800 | A0A3S3M3M9 | A0A3S3PQ82 | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | Putative pectate lyase 21. | 0.907 |
CKAN_00455400 | CKAN_00090500 | A0A3S3NVT7 | A0A3S3M3M9 | Pectate lyase. | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.894 |
CKAN_00455400 | CKAN_01184700 | A0A3S3NVT7 | A0A3S3MNC0 | Pectate lyase. | Putative polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.921 |
CKAN_00455400 | CKAN_01645500 | A0A3S3NVT7 | A0A443P9U3 | Pectate lyase. | Pectinesterase. | 0.898 |
CKAN_00492400 | CKAN_01645500 | A0A3S3M3K2 | A0A443P9U3 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family. | Pectinesterase. | 0.896 |
CKAN_00531600 | CKAN_00090500 | A0A443NEA2 | A0A3S3M3M9 | Pectate lyase. | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.907 |
CKAN_00531600 | CKAN_01184700 | A0A443NEA2 | A0A3S3MNC0 | Pectate lyase. | Putative polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.922 |
CKAN_00531600 | CKAN_01645500 | A0A443NEA2 | A0A443P9U3 | Pectate lyase. | Pectinesterase. | 0.898 |
CKAN_00724100 | CKAN_00090500 | A0A443NJK4 | A0A3S3M3M9 | Pectate lyase. | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.895 |
CKAN_00724100 | CKAN_01184700 | A0A443NJK4 | A0A3S3MNC0 | Pectate lyase. | Putative polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.907 |
CKAN_00724100 | CKAN_01645500 | A0A443NJK4 | A0A443P9U3 | Pectate lyase. | Pectinesterase. | 0.873 |
CKAN_00727000 | CKAN_00090500 | A0A3S3Q3L3 | A0A3S3M3M9 | Pectate lyase. | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.895 |
CKAN_00727000 | CKAN_01184700 | A0A3S3Q3L3 | A0A3S3MNC0 | Pectate lyase. | Putative polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.907 |
CKAN_00727000 | CKAN_01645500 | A0A3S3Q3L3 | A0A443P9U3 | Pectate lyase. | Pectinesterase. | 0.873 |
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