Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00073600 | CKAN_00229300 | A0A3S3LVR9 | A0A443N652 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Homeobox protein knotted-1-like protein 2. | 0.553 |
CKAN_00073600 | CKAN_00642000 | A0A3S3LVR9 | A0A3S3Q3D4 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Homeobox protein knotted-1-like protein 2. | 0.553 |
CKAN_00073600 | CKAN_01681000 | A0A3S3LVR9 | A0A443PAQ5 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Homeobox protein BEL1. | 0.553 |
CKAN_00073600 | CKAN_02331600 | A0A3S3LVR9 | A0A3S3R1W3 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Homeobox protein knotted-1-like protein 2 isoform X2. | 0.553 |
CKAN_00073600 | CKAN_02357100 | A0A3S3LVR9 | A0A3S4PSH1 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Homeobox protein knotted-1-like protein 1 isoform X1. | 0.553 |
CKAN_00229300 | CKAN_00073600 | A0A443N652 | A0A3S3LVR9 | Homeobox protein knotted-1-like protein 2. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.553 |
CKAN_00229300 | CKAN_00873200 | A0A443N652 | A0A443NNL0 | Homeobox protein knotted-1-like protein 2. | E3 ubiquitin-protein ligase UPL5-like protein isoform X1. | 0.619 |
CKAN_00229300 | CKAN_01123100 | A0A443N652 | A0A3S4NWF5 | Homeobox protein knotted-1-like protein 2. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.553 |
CKAN_00229300 | CKAN_01681000 | A0A443N652 | A0A443PAQ5 | Homeobox protein knotted-1-like protein 2. | Homeobox protein BEL1. | 0.417 |
CKAN_00642000 | CKAN_00073600 | A0A3S3Q3D4 | A0A3S3LVR9 | Homeobox protein knotted-1-like protein 2. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.553 |
CKAN_00642000 | CKAN_00873200 | A0A3S3Q3D4 | A0A443NNL0 | Homeobox protein knotted-1-like protein 2. | E3 ubiquitin-protein ligase UPL5-like protein isoform X1. | 0.619 |
CKAN_00642000 | CKAN_01123100 | A0A3S3Q3D4 | A0A3S4NWF5 | Homeobox protein knotted-1-like protein 2. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.553 |
CKAN_00642000 | CKAN_01681000 | A0A3S3Q3D4 | A0A443PAQ5 | Homeobox protein knotted-1-like protein 2. | Homeobox protein BEL1. | 0.437 |
CKAN_00873200 | CKAN_00229300 | A0A443NNL0 | A0A443N652 | E3 ubiquitin-protein ligase UPL5-like protein isoform X1. | Homeobox protein knotted-1-like protein 2. | 0.619 |
CKAN_00873200 | CKAN_00642000 | A0A443NNL0 | A0A3S3Q3D4 | E3 ubiquitin-protein ligase UPL5-like protein isoform X1. | Homeobox protein knotted-1-like protein 2. | 0.619 |
CKAN_00873200 | CKAN_01681000 | A0A443NNL0 | A0A443PAQ5 | E3 ubiquitin-protein ligase UPL5-like protein isoform X1. | Homeobox protein BEL1. | 0.619 |
CKAN_00873200 | CKAN_02331600 | A0A443NNL0 | A0A3S3R1W3 | E3 ubiquitin-protein ligase UPL5-like protein isoform X1. | Homeobox protein knotted-1-like protein 2 isoform X2. | 0.619 |
CKAN_00873200 | CKAN_02357100 | A0A443NNL0 | A0A3S4PSH1 | E3 ubiquitin-protein ligase UPL5-like protein isoform X1. | Homeobox protein knotted-1-like protein 1 isoform X1. | 0.619 |
CKAN_01123100 | CKAN_00229300 | A0A3S4NWF5 | A0A443N652 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Homeobox protein knotted-1-like protein 2. | 0.553 |
CKAN_01123100 | CKAN_00642000 | A0A3S4NWF5 | A0A3S3Q3D4 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Homeobox protein knotted-1-like protein 2. | 0.553 |
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