Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00172200 | CKAN_01115700 | A0A3S3PTY3 | A0A3S3N7X2 | Putative inactive nicotinamidase. | Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1. | 0.779 |
CKAN_00172200 | CKAN_01576200 | A0A3S3PTY3 | A0A3S3QMQ9 | Putative inactive nicotinamidase. | Gluconokinase; Belongs to the gluconokinase GntK/GntV family. | 0.889 |
CKAN_00172200 | CKAN_01754500 | A0A3S3PTY3 | A0A443PCP1 | Putative inactive nicotinamidase. | Peroxisomal 2,4-dienoyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.734 |
CKAN_00172200 | CKAN_01874800 | A0A3S3PTY3 | A0A3S3NKW0 | Putative inactive nicotinamidase. | Putative acyl-activating enzyme 19 isoform X1. | 0.749 |
CKAN_00656500 | CKAN_00714100 | A0A3S3MZQ8 | A0A3S3MEY1 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Nitrate reductase NADH-like protein. | 0.708 |
CKAN_00656500 | CKAN_01115700 | A0A3S3MZQ8 | A0A3S3N7X2 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1. | 0.956 |
CKAN_00656500 | CKAN_01754500 | A0A3S3MZQ8 | A0A443PCP1 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Peroxisomal 2,4-dienoyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.711 |
CKAN_00656500 | CKAN_01923800 | A0A3S3MZQ8 | A0A443PHA0 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.708 |
CKAN_00656500 | CKAN_02206300 | A0A3S3MZQ8 | A0A443PPZ2 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Nitrate reductase 2. | 0.708 |
CKAN_00714100 | CKAN_00656500 | A0A3S3MEY1 | A0A3S3MZQ8 | Nitrate reductase NADH-like protein. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.708 |
CKAN_00714100 | CKAN_01115700 | A0A3S3MEY1 | A0A3S3N7X2 | Nitrate reductase NADH-like protein. | Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1. | 0.557 |
CKAN_00714100 | CKAN_01754500 | A0A3S3MEY1 | A0A443PCP1 | Nitrate reductase NADH-like protein. | Peroxisomal 2,4-dienoyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.699 |
CKAN_00714100 | CKAN_01874800 | A0A3S3MEY1 | A0A3S3NKW0 | Nitrate reductase NADH-like protein. | Putative acyl-activating enzyme 19 isoform X1. | 0.601 |
CKAN_00714100 | CKAN_01923800 | A0A3S3MEY1 | A0A443PHA0 | Nitrate reductase NADH-like protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.999 |
CKAN_00714100 | CKAN_01940300 | A0A3S3MEY1 | A0A443PHT9 | Nitrate reductase NADH-like protein. | Rieske 2Fe-2S iron-sulfur domain-containing protein. | 0.954 |
CKAN_00714100 | CKAN_02206300 | A0A3S3MEY1 | A0A443PPZ2 | Nitrate reductase NADH-like protein. | Nitrate reductase 2. | 0.999 |
CKAN_01115700 | CKAN_00172200 | A0A3S3N7X2 | A0A3S3PTY3 | Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1. | Putative inactive nicotinamidase. | 0.779 |
CKAN_01115700 | CKAN_00656500 | A0A3S3N7X2 | A0A3S3MZQ8 | Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.956 |
CKAN_01115700 | CKAN_00714100 | A0A3S3N7X2 | A0A3S3MEY1 | Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1. | Nitrate reductase NADH-like protein. | 0.557 |
CKAN_01115700 | CKAN_01754500 | A0A3S3N7X2 | A0A443PCP1 | Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1. | Peroxisomal 2,4-dienoyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.915 |
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