STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01756500Thylakoid lumenal protein, chloroplastic isoform X1; Belongs to the peroxidase family. (373 aa)    
Predicted Functional Partners:
CKAN_01201900
Glutathione S-transferase DHAR3, chloroplastic; Belongs to the GST superfamily.
   
 
 0.931
CKAN_02197600
Heme peroxidase; Belongs to the peroxidase family.
   
 
0.900
CKAN_00593700
ADP,ATP carrier protein.
   
 
 0.897
CKAN_01218600
Monodehydroascorbate reductase.
     
 0.892
CKAN_02657700
Monodehydroascorbate reductase.
     
 0.892
CKAN_01676800
Monodehydroascorbate reductase, chloroplastic/mitochondrial.
     
 0.888
CKAN_02321200
Monodehydroascorbate reductase 4, peroxisomal.
     
 0.888
CKAN_00065100
Putative L-ascorbate peroxidase 6 isoform X2; Belongs to the peroxidase family.
     
 0.886
CKAN_00302200
L-galactono-1,4-lactone dehydrogenase, mitochondrial.
     
 0.876
CKAN_01485500
Ascorbate peroxidase; Belongs to the peroxidase family.
     
0.876
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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