STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01826900SAP30-binding protein isoform X2. (461 aa)    
Predicted Functional Partners:
CKAN_02209800
THO complex subunit 1.
   
   0.749
CKAN_00025400
Cyclin-dependent kinase G-2 isoform X1.
   
   0.747
CKAN_02630000
Cyclin-dependent kinase G-2 isoform X1.
   
   0.747
CKAN_01548500
Histone deacetylase complex subunit SAP18.
   
 
  0.637
CKAN_01683200
Histone deacetylase complex subunit SAP18.
   
 
  0.637
CKAN_00656100
Protein MRG1.
   
 
  0.555
CKAN_01171900
Protein MRG1.
   
 
  0.555
CKAN_02104600
DNA-damage-repair/toleration protein DRT111, chloroplastic.
   
   0.549
CKAN_00102600
Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
  0.525
CKAN_02309400
Splicing factor 3A subunit 2.
   
   0.502
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (22%) [HD]