Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00387300 | CKAN_00917000 | A0A3S3NUM0 | A0A3S4NR68 | WD repeat-containing protein 76. | E3 ubiquitin-protein ligase COP1. | 0.736 |
CKAN_00387300 | CKAN_01049900 | A0A3S3NUM0 | A0A3S3MY61 | WD repeat-containing protein 76. | Cullin-4-like protein isoform X1; Belongs to the cullin family. | 0.962 |
CKAN_00387300 | CKAN_01533300 | A0A3S3NUM0 | A0A443P6N4 | WD repeat-containing protein 76. | Protein SPA1-RELATED 3-like protein isoform X2. | 0.736 |
CKAN_00387300 | CKAN_01779500 | A0A3S3NUM0 | A0A3S4PD06 | WD repeat-containing protein 76. | DNA damage-binding protein 1. | 0.982 |
CKAN_00387300 | CKAN_01820100 | A0A3S3NUM0 | A0A3S3QR39 | WD repeat-containing protein 76. | Protein SPA1-RELATED 3-like protein isoform X2. | 0.736 |
CKAN_00387300 | CKAN_01854700 | A0A3S3NUM0 | A0A443PFF7 | WD repeat-containing protein 76. | Light-mediated development protein DET1 isoform X1. | 0.924 |
CKAN_00387300 | CKAN_02108500 | A0A3S3NUM0 | A0A3S3QWZ6 | WD repeat-containing protein 76. | WD repeat-containing protein RUP2. | 0.403 |
CKAN_00887500 | CKAN_00917000 | A0A3S4NQH2 | A0A3S4NR68 | Protein SPA1-RELATED 2-like protein isoform X1. | E3 ubiquitin-protein ligase COP1. | 0.978 |
CKAN_00887500 | CKAN_01533300 | A0A3S4NQH2 | A0A443P6N4 | Protein SPA1-RELATED 2-like protein isoform X1. | Protein SPA1-RELATED 3-like protein isoform X2. | 0.934 |
CKAN_00887500 | CKAN_01820100 | A0A3S4NQH2 | A0A3S3QR39 | Protein SPA1-RELATED 2-like protein isoform X1. | Protein SPA1-RELATED 3-like protein isoform X2. | 0.934 |
CKAN_00887500 | CKAN_01854700 | A0A3S4NQH2 | A0A443PFF7 | Protein SPA1-RELATED 2-like protein isoform X1. | Light-mediated development protein DET1 isoform X1. | 0.927 |
CKAN_00887500 | CKAN_01890100 | A0A3S4NQH2 | A0A3S3QUJ0 | Protein SPA1-RELATED 2-like protein isoform X1. | Protein DAMAGED DNA-BINDING 2. | 0.871 |
CKAN_00887500 | CKAN_02108500 | A0A3S4NQH2 | A0A3S3QWZ6 | Protein SPA1-RELATED 2-like protein isoform X1. | WD repeat-containing protein RUP2. | 0.887 |
CKAN_00917000 | CKAN_00387300 | A0A3S4NR68 | A0A3S3NUM0 | E3 ubiquitin-protein ligase COP1. | WD repeat-containing protein 76. | 0.736 |
CKAN_00917000 | CKAN_00887500 | A0A3S4NR68 | A0A3S4NQH2 | E3 ubiquitin-protein ligase COP1. | Protein SPA1-RELATED 2-like protein isoform X1. | 0.978 |
CKAN_00917000 | CKAN_01049900 | A0A3S4NR68 | A0A3S3MY61 | E3 ubiquitin-protein ligase COP1. | Cullin-4-like protein isoform X1; Belongs to the cullin family. | 0.690 |
CKAN_00917000 | CKAN_01533300 | A0A3S4NR68 | A0A443P6N4 | E3 ubiquitin-protein ligase COP1. | Protein SPA1-RELATED 3-like protein isoform X2. | 0.902 |
CKAN_00917000 | CKAN_01779500 | A0A3S4NR68 | A0A3S4PD06 | E3 ubiquitin-protein ligase COP1. | DNA damage-binding protein 1. | 0.578 |
CKAN_00917000 | CKAN_01820100 | A0A3S4NR68 | A0A3S3QR39 | E3 ubiquitin-protein ligase COP1. | Protein SPA1-RELATED 3-like protein isoform X2. | 0.902 |
CKAN_00917000 | CKAN_01854700 | A0A3S4NR68 | A0A443PFF7 | E3 ubiquitin-protein ligase COP1. | Light-mediated development protein DET1 isoform X1. | 0.946 |
page 1 of 5