Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00118100 | CKAN_01871300 | A0A443N349 | A0A443PFV3 | Protein IQ-DOMAIN 31 isoform X1. | Protein IQ-DOMAIN 1. | 0.409 |
CKAN_01798400 | CKAN_01871300 | A0A443PDV6 | A0A443PFV3 | IQ motif. | Protein IQ-DOMAIN 1. | 0.424 |
CKAN_01798800 | CKAN_01871300 | A0A3S3N5Z6 | A0A443PFV3 | Protein IQ-DOMAIN 14-like protein. | Protein IQ-DOMAIN 1. | 0.424 |
CKAN_01870600 | CKAN_01871300 | A0A3S3QS48 | A0A443PFV3 | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | Protein IQ-DOMAIN 1. | 0.432 |
CKAN_01870600 | CKAN_01974900 | A0A3S3QS48 | A0A3S3P0U0 | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins. | 0.522 |
CKAN_01871300 | CKAN_00118100 | A0A443PFV3 | A0A443N349 | Protein IQ-DOMAIN 1. | Protein IQ-DOMAIN 31 isoform X1. | 0.409 |
CKAN_01871300 | CKAN_01798400 | A0A443PFV3 | A0A443PDV6 | Protein IQ-DOMAIN 1. | IQ motif. | 0.424 |
CKAN_01871300 | CKAN_01798800 | A0A443PFV3 | A0A3S3N5Z6 | Protein IQ-DOMAIN 1. | Protein IQ-DOMAIN 14-like protein. | 0.424 |
CKAN_01871300 | CKAN_01870600 | A0A443PFV3 | A0A3S3QS48 | Protein IQ-DOMAIN 1. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | 0.432 |
CKAN_01871300 | CKAN_01974900 | A0A443PFV3 | A0A3S3P0U0 | Protein IQ-DOMAIN 1. | Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins. | 0.431 |
CKAN_01871300 | CKAN_01975400 | A0A443PFV3 | A0A443PIQ9 | Protein IQ-DOMAIN 1. | Protein IQ-DOMAIN 14-like protein. | 0.442 |
CKAN_01974900 | CKAN_01870600 | A0A3S3P0U0 | A0A3S3QS48 | Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | 0.522 |
CKAN_01974900 | CKAN_01871300 | A0A3S3P0U0 | A0A443PFV3 | Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins. | Protein IQ-DOMAIN 1. | 0.431 |
CKAN_01975400 | CKAN_01871300 | A0A443PIQ9 | A0A443PFV3 | Protein IQ-DOMAIN 14-like protein. | Protein IQ-DOMAIN 1. | 0.442 |