STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01883600Diacylglycerol kinase. (681 aa)    
Predicted Functional Partners:
CKAN_02288200
Alkaline ceramidase 3-like protein.
    
 0.943
CKAN_01143800
Ceramide glucosyltransferase.
    
 0.940
CKAN_00339600
Drug/metabolite transporter.
    
 0.917
CKAN_00817000
Drug/metabolite transporter.
    
 0.917
CKAN_02161300
Neutral ceramidase.
    
 0.916
CKAN_01385000
LAG1 longevity assurance 3-like protein isoform X2.
     
 0.914
CKAN_01506800
Neutral ceramidase.
    
 0.914
CKAN_00550700
ASC1-like protein 1.
     
 0.914
CKAN_01024500
Neutral ceramidase.
    
 0.914
CKAN_02191300
Non-lysosomal glucosylceramidase isoform X1.
     
 0.910
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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