STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01912700Putative carboxylesterase 2. (328 aa)    
Predicted Functional Partners:
CKAN_02131500
Auxin F-box protein 5.
    
 0.923
CKAN_02627700
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
  0.837
CKAN_01588400
Protein TIFY 9.
   
 0.748
CKAN_01794000
Transcription factor MYC2-like protein.
    
 0.714
CKAN_00492400
Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family.
    
 0.707
CKAN_02351000
Putative polygalacturonase.
    
 0.707
CKAN_02545500
NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9, mitochondrial.
  
   0.705
CKAN_01571900
Transcription factor MYC2.
   
 0.698
CKAN_01626400
Transcription factor MYC.
   
 0.698
CKAN_02507800
4Fe-4S binding domain-containing protein.
  
 
 0.696
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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