Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00430300 | CKAN_00968200 | A0A443NBK9 | A0A3S3P1V7 | Splicing factor 3B subunit 1. | Ribonucleoprotein A, chloroplastic. | 0.598 |
CKAN_00430300 | CKAN_00980800 | A0A443NBK9 | A0A443NRK4 | Splicing factor 3B subunit 1. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.993 |
CKAN_00430300 | CKAN_01571400 | A0A443NBK9 | A0A443P7Q8 | Splicing factor 3B subunit 1. | Ribonucleoprotein A, chloroplastic. | 0.598 |
CKAN_00430300 | CKAN_01722100 | A0A443NBK9 | A0A443PBS5 | Splicing factor 3B subunit 1. | RRM domain-containing protein. | 0.598 |
CKAN_00430300 | CKAN_01937400 | A0A443NBK9 | A0A443PHN1 | Splicing factor 3B subunit 1. | RNA-binding protein 24 isoform X1. | 0.514 |
CKAN_00430300 | CKAN_02084500 | A0A443NBK9 | A0A443PLQ8 | Splicing factor 3B subunit 1. | Serine/arginine-rich splicing factor SR45a. | 0.462 |
CKAN_00430300 | CKAN_02221700 | A0A443NBK9 | A0A443PQE5 | Splicing factor 3B subunit 1. | Serine/arginine-rich splicing factor SC35-like protein. | 0.647 |
CKAN_00430300 | CKAN_02277400 | A0A443NBK9 | A0A443PRU6 | Splicing factor 3B subunit 1. | Glycine-rich RNA-binding protein 3, mitochondrial-like protein. | 0.598 |
CKAN_00430300 | CKAN_02602300 | A0A443NBK9 | A0A3S3R9V2 | Splicing factor 3B subunit 1. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.993 |
CKAN_00968200 | CKAN_00430300 | A0A3S3P1V7 | A0A443NBK9 | Ribonucleoprotein A, chloroplastic. | Splicing factor 3B subunit 1. | 0.598 |
CKAN_00968200 | CKAN_01722100 | A0A3S3P1V7 | A0A443PBS5 | Ribonucleoprotein A, chloroplastic. | RRM domain-containing protein. | 0.479 |
CKAN_00968200 | CKAN_01937400 | A0A3S3P1V7 | A0A443PHN1 | Ribonucleoprotein A, chloroplastic. | RNA-binding protein 24 isoform X1. | 0.463 |
CKAN_00968200 | CKAN_02084500 | A0A3S3P1V7 | A0A443PLQ8 | Ribonucleoprotein A, chloroplastic. | Serine/arginine-rich splicing factor SR45a. | 0.712 |
CKAN_00968200 | CKAN_02221700 | A0A3S3P1V7 | A0A443PQE5 | Ribonucleoprotein A, chloroplastic. | Serine/arginine-rich splicing factor SC35-like protein. | 0.742 |
CKAN_00968200 | CKAN_02277400 | A0A3S3P1V7 | A0A443PRU6 | Ribonucleoprotein A, chloroplastic. | Glycine-rich RNA-binding protein 3, mitochondrial-like protein. | 0.499 |
CKAN_00980800 | CKAN_00430300 | A0A443NRK4 | A0A443NBK9 | Splicing factor subunit; Belongs to the SF3B5 family. | Splicing factor 3B subunit 1. | 0.993 |
CKAN_00980800 | CKAN_01937400 | A0A443NRK4 | A0A443PHN1 | Splicing factor subunit; Belongs to the SF3B5 family. | RNA-binding protein 24 isoform X1. | 0.404 |
CKAN_01571400 | CKAN_00430300 | A0A443P7Q8 | A0A443NBK9 | Ribonucleoprotein A, chloroplastic. | Splicing factor 3B subunit 1. | 0.598 |
CKAN_01571400 | CKAN_01722100 | A0A443P7Q8 | A0A443PBS5 | Ribonucleoprotein A, chloroplastic. | RRM domain-containing protein. | 0.441 |
CKAN_01571400 | CKAN_01937400 | A0A443P7Q8 | A0A443PHN1 | Ribonucleoprotein A, chloroplastic. | RNA-binding protein 24 isoform X1. | 0.439 |
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