STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01948000Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial. (286 aa)    
Predicted Functional Partners:
CKAN_01875700
Amidophosphoribosyltransferase, chloroplastic-like protein.
 
 0.969
CKAN_00118900
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
 0.969
CKAN_02325400
Bifunctional purine biosynthesis protein PurH-like protein isoform X2.
 
 0.962
CKAN_01115700
Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1.
  
 
 0.961
CKAN_01500700
AIR synthase related protein.
  
 
 0.954
CKAN_02130800
Phosphoribosylglycinamide formyltransferase, chloroplastic.
 
 
 0.954
CKAN_01414000
Phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X1.
 
 0.948
CKAN_02651600
Phosphoribosylaminoimidazole carboxylase, chloroplastic.
 
 0.947
CKAN_01455400
Urease accessory protein UreD.
  
 0.943
CKAN_01886100
Formyltetrahydrofolate deformylase 1, mitochondrial isoform X1.
  
 
 0.940
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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