STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01957900DEP domain-containing protein. (715 aa)    
Predicted Functional Partners:
CKAN_00102600
Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.832
CKAN_00403900
Death-associated protein kinase 1.
     
 0.810
CKAN_02016600
Choline/ethanolaminephosphotransferase 1 isoform X1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.795
CKAN_01924200
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
     
 0.785
CKAN_01284400
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.681
CKAN_01642300
Phosphatidate cytidylyltransferase 4, chloroplastic isoform X1.
     
 0.681
CKAN_00302800
Triacylglycerol lipase SDP1.
     
 0.662
CKAN_00845700
Patatin/Phospholipase A2-related.
     
 0.662
CKAN_00684100
Diacylglycerol O-acyltransferase 2D-like protein.
    
 0.630
CKAN_00099600
Diacylglycerol O-acyltransferase 2.
    
 0.630
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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