Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00602900 | CKAN_01975800 | A0A443NGB7 | A0A443PIR3 | Aspartate/glutamate/uridylate kinase. | F-box/LRR-repeat protein 10. | 0.851 |
CKAN_00616700 | CKAN_00909800 | A0A3S3MJQ3 | A0A443NPN5 | Squalene/phytoene synthase. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.886 |
CKAN_00616700 | CKAN_01975800 | A0A3S3MJQ3 | A0A443PIR3 | Squalene/phytoene synthase. | F-box/LRR-repeat protein 10. | 0.711 |
CKAN_00692500 | CKAN_00806400 | A0A3S3NF50 | A0A3S3N2C3 | Cullin-3A-like protein isoform X1; Belongs to the cullin family. | RING-box protein 1a. | 0.937 |
CKAN_00692500 | CKAN_01937000 | A0A3S3NF50 | A0A3S3QVG9 | Cullin-3A-like protein isoform X1; Belongs to the cullin family. | Cullin-associated NEDD8-dissociated protein 1 isoform X1. | 0.953 |
CKAN_00692500 | CKAN_01975800 | A0A3S3NF50 | A0A443PIR3 | Cullin-3A-like protein isoform X1; Belongs to the cullin family. | F-box/LRR-repeat protein 10. | 0.540 |
CKAN_00692500 | CKAN_02123300 | A0A3S3NF50 | A0A3S3N4B1 | Cullin-3A-like protein isoform X1; Belongs to the cullin family. | Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. | 0.787 |
CKAN_00692500 | CKAN_02523800 | A0A3S3NF50 | A0A443PYR1 | Cullin-3A-like protein isoform X1; Belongs to the cullin family. | RING-box protein 1a-like protein. | 0.928 |
CKAN_00806400 | CKAN_00692500 | A0A3S3N2C3 | A0A3S3NF50 | RING-box protein 1a. | Cullin-3A-like protein isoform X1; Belongs to the cullin family. | 0.937 |
CKAN_00806400 | CKAN_01937000 | A0A3S3N2C3 | A0A3S3QVG9 | RING-box protein 1a. | Cullin-associated NEDD8-dissociated protein 1 isoform X1. | 0.962 |
CKAN_00806400 | CKAN_01975800 | A0A3S3N2C3 | A0A443PIR3 | RING-box protein 1a. | F-box/LRR-repeat protein 10. | 0.621 |
CKAN_00806400 | CKAN_02123300 | A0A3S3N2C3 | A0A3S3N4B1 | RING-box protein 1a. | Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. | 0.991 |
CKAN_00909800 | CKAN_00616700 | A0A443NPN5 | A0A3S3MJQ3 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | Squalene/phytoene synthase. | 0.886 |
CKAN_00909800 | CKAN_01137200 | A0A443NPN5 | A0A3S3MMH1 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | Squalene synthase. | 0.886 |
CKAN_00909800 | CKAN_01975800 | A0A443NPN5 | A0A443PIR3 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | F-box/LRR-repeat protein 10. | 0.844 |
CKAN_01123500 | CKAN_01975800 | A0A3S3MU98 | A0A443PIR3 | tRNA dimethylallyltransferase 2 isoform X1; Belongs to the IPP transferase family. | F-box/LRR-repeat protein 10. | 0.712 |
CKAN_01137200 | CKAN_00909800 | A0A3S3MMH1 | A0A443NPN5 | Squalene synthase. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.886 |
CKAN_01137200 | CKAN_01975800 | A0A3S3MMH1 | A0A443PIR3 | Squalene synthase. | F-box/LRR-repeat protein 10. | 0.711 |
CKAN_01937000 | CKAN_00692500 | A0A3S3QVG9 | A0A3S3NF50 | Cullin-associated NEDD8-dissociated protein 1 isoform X1. | Cullin-3A-like protein isoform X1; Belongs to the cullin family. | 0.953 |
CKAN_01937000 | CKAN_00806400 | A0A3S3QVG9 | A0A3S3N2C3 | Cullin-associated NEDD8-dissociated protein 1 isoform X1. | RING-box protein 1a. | 0.962 |
page 1 of 3