STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02019300Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic. (285 aa)    
Predicted Functional Partners:
CKAN_00765600
NADPH-quinone oxidoreductase subunit N, chloroplastic.
  
  
 0.720
CKAN_00717400
NADPH-quinone oxidoreductase subunit M, chloroplastic.
  
 
 
 0.695
CKAN_02199800
NADPH-quinone oxidoreductase subunit M, chloroplastic.
  
 
 
 0.655
CKAN_00899900
Chlororespiratory reduction 42.
  
 
 0.637
CKAN_02445600
NADPH-quinone oxidoreductase subunit S, chloroplastic.
  
  
 0.623
CKAN_00112700
Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic.
   
  
 0.536
CKAN_02202700
NADPH-quinone oxidoreductase subunit O, chloroplastic.
   
 
 0.516
CKAN_02507800
4Fe-4S binding domain-containing protein.
    
 
 0.512
CKAN_00393500
Dihydrodipicolinate reductase-like protein CRR1, chloroplastic.
   
  
 0.473
CKAN_02246000
Uncharacterized protein.
  
     0.471
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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