STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02052700Zinc finger protein CONSTANS-LIKE 5-like protein. (397 aa)    
Predicted Functional Partners:
CKAN_00899600
Nuclear transcription factor Y subunit C-9.
    
 
 0.746
CKAN_00037400
Nuclear transcription factor Y subunit C-2-like protein.
    
 
 0.746
CKAN_01764300
Nuclear transcription factor Y subunit C-2-like protein.
    
 
 0.746
CKAN_02438400
Nuclear transcription factor Y subunit C-9.
    
 
 0.746
CKAN_02230500
Nuclear transcription factor Y subunit B-3-like protein.
    
 
 0.743
CKAN_01892600
Nuclear transcription factor Y subunit B-1-like protein.
    
 
 0.743
CKAN_00695700
Nuclear transcription factor Y subunit B-1-like protein.
    
 
 0.743
CKAN_00602200
Protein GIGANTEA.
    
 0.550
CKAN_02501500
SET domain-containing protein.
    
 0.492
CKAN_01089200
TATA-box-binding protein.
   
 0.491
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (18%) [HD]