STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02076800Bifunctional epoxide hydrolase 2-like protein. (330 aa)    
Predicted Functional Partners:
CKAN_01874800
Putative acyl-activating enzyme 19 isoform X1.
    
 0.794
CKAN_00172200
Putative inactive nicotinamidase.
  
 0.766
CKAN_01930100
2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial isoform X1.
  
 0.741
CKAN_01832700
Nitroreductase-like protein.
  
 
 0.725
CKAN_01067200
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
   
 0.717
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
 0.697
CKAN_00543500
Magnesium protoporphyrin IX methyltransferase, chloroplastic.
    
 0.697
CKAN_00142700
Acetyl-coenzyme A synthetase.
    
 0.690
CKAN_00086800
Putative acyl-activating enzyme 18, peroxisomal isoform X1.
    
 0.690
CKAN_00973100
Ca2+ sensor EF-Hand superfamily.
    
 0.690
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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