STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02086600Mitogen-activated protein kinase kinase kinase YODA-like protein. (907 aa)    
Predicted Functional Partners:
CKAN_01394600
Septum-promoting GTP-binding protein 1.
    
 0.894
CKAN_00372000
Mitogen-activated protein kinase kinase 5-like protein; Belongs to the protein kinase superfamily.
  
0.854
CKAN_01573000
Mitogen-activated protein kinase kinase 10; Belongs to the protein kinase superfamily.
  
0.854
CKAN_01875500
Mitogen-activated protein kinase kinase 10-like protein; Belongs to the protein kinase superfamily.
  
0.853
CKAN_00345500
Mitogen-activated protein kinase kinase 9-like protein; Belongs to the protein kinase superfamily.
  
0.851
CKAN_02745100
Mitogen-activated protein kinase kinase 5-like protein.
   
 0.831
CKAN_00355600
LRR receptor-like serine/threonine-protein kinase ERECTA.
    
 0.807
CKAN_01651300
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
0.807
CKAN_02525800
LRR receptor-like serine/threonine-protein kinase ERECTA isoform X2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
0.807
CKAN_01928700
Mitogen-activated protein kinase kinase kinase YODA-like protein.
  
  
 
0.801
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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