STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02156000Zinc finger protein. (303 aa)    
Predicted Functional Partners:
CKAN_01157100
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like protein.
     
 0.938
CKAN_01238500
N-acetylglucosaminyl transferase component.
     
 0.927
CKAN_00278100
N-acetylglucosaminyl transferase component.
     
 0.927
CKAN_00084700
HI0933_like domain-containing protein.
     
 0.926
CKAN_01943000
Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C.
     
 0.926
CKAN_02219200
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.
     
 0.925
CKAN_00729000
Sulfoquinovosyl transferase SQD2.
    
 0.901
CKAN_02151000
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
    
 0.901
CKAN_02679000
Glycosyl transferase.
    
 0.901
CKAN_02265200
Uncharacterized protein.
     
 0.887
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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