STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02170400Uncharacterized protein. (1025 aa)    
Predicted Functional Partners:
CKAN_01902500
Kinetochore protein ndc80.
    
 
 0.947
CKAN_02632200
Mitotic spindle checkpoint protein MAD2.
   
 0.941
CKAN_02328500
Wee1-like protein kinase; Belongs to the protein kinase superfamily.
    
   0.908
CKAN_01172400
Microtubule-associated protein RP/EB family member 1C-like protein.
   
 
 0.883
CKAN_00692900
Microtubule-associated protein RP/EB family member 1B-like protein.
   
 
 0.879
CKAN_01282100
Calponin domain-containing protein.
   
 
 0.879
CKAN_00435100
Kinetochore protein Nuf2-like protein.
   
 
 0.831
CKAN_00436100
Kinetochore protein Nuf2-like protein.
   
 
 0.831
CKAN_02023800
Putative kinetochore protein NUF2.
   
 
 0.831
CKAN_00436400
Kinetochore protein Nuf2.
   
 
 0.831
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.