STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02188700D-isomer specific 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (385 aa)    
Predicted Functional Partners:
CKAN_00563000
Ketose-bisphosphate aldolase.
  
 
 0.927
CKAN_01115700
Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1.
    
 0.865
CKAN_01256900
Malate synthase; Belongs to the malate synthase family.
  
 
 0.848
CKAN_02391500
Fumarate lyase.
  
 
 0.844
CKAN_00771400
Threonine dehydratase.
  
 
 0.844
CKAN_00433100
L-2-hydroxyglutarate dehydrogenase, mitochondrial.
  
 
 0.836
CKAN_00847000
Serine--glyoxylate aminotransferase.
  
 
 0.836
CKAN_00302000
Serine--glyoxylate aminotransferase.
  
 
 0.836
CKAN_02543800
Dihydroxy-acid dehydratase, chloroplastic.
    
 0.834
CKAN_00037000
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.833
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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