STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02239500Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (322 aa)    
Predicted Functional Partners:
CKAN_01469500
30-cleavage and polyadenylation specificity factor 30.
    
 0.977
CKAN_00040700
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.960
CKAN_00777200
Protein ANTHESIS POMOTING FACTOR 1 isoform X2.
    
 0.945
CKAN_02334900
WD40 repeat.
    
 0.945
CKAN_00934800
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.944
CKAN_02300200
RNA polymerase II subunit A C-terminal domain-containing protein.
    
 0.940
CKAN_02300400
RNA polymerase II subunit A C-terminal domain-containing protein.
    
 0.940
CKAN_00218800
WD40 repeat.
   
 0.932
CKAN_00218600
Flowering time control protein FY.
   
 0.932
CKAN_00734500
Cleavage and polyadenylation specificity factor subunit 3-I.
   
 0.924
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.