STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02267100AP-5 complex subunit zeta-1. (294 aa)    
Predicted Functional Partners:
CKAN_01748500
Adenosine 5' phosphosulfate reductase.
    
 0.920
CKAN_02375500
Adenosine 5' phosphosulfate reductase.
    
 0.920
CKAN_02325800
Phosphoglucan phosphatase LSF1, chloroplastic isoform X1.
    
 0.879
CKAN_02113400
Phosphoglucan phosphatase DSP4, amyloplastic isoform X1.
    
 0.879
CKAN_01213300
NAD-dependent protein deacetylase SRT1.
    
 0.816
CKAN_00265000
BTB/POZ and TAZ domain-containing protein 1-like protein.
    
 0.782
CKAN_01299700
Zinc finger protein.
    
 0.782
CKAN_02327100
Histone acetyltransferase HAC1-like protein.
    
 0.782
CKAN_02639300
BTB/POZ and TAZ domain-containing protein 1-like protein.
    
 0.782
CKAN_00648800
Zinc finger protein.
    
 0.782
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.