STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02293100Pyruvate, phosphate dikinase 2 isoform X1. (969 aa)    
Predicted Functional Partners:
CKAN_00135100
Alanine aminotransferase 2.
     
 0.927
CKAN_01070300
Phosphoenolpyruvate carboxylase.
     
 0.926
CKAN_02326700
Phosphoenolpyruvate carboxylase 4-like protein.
     
 0.926
CKAN_01370500
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
     
 0.910
CKAN_00563000
Ketose-bisphosphate aldolase.
     
 0.907
CKAN_01506900
Cytosolic enolase 3 isoform X1.
 
   
 0.905
CKAN_01449900
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
     
 0.904
CKAN_01387600
Enolase 1, chloroplastic.
 
   
 0.901
CKAN_02335500
Glutamate--glyoxylate aminotransferase 2.
     
 0.900
CKAN_00933400
Transketolase, chloroplastic.
     
 0.898
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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