STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02305000CTL-like protein; Belongs to the CTL (choline transporter-like) family. (536 aa)    
Predicted Functional Partners:
CKAN_01873400
Urea-proton symporter DUR3; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.799
CKAN_00452000
Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY.
   
    0.713
CKAN_01429300
Binding partner of ACD11 1 isoform X1.
   
  
 0.443
CKAN_00352100
E3 ubiquitin-protein ligase RING1-like protein.
    
 
 0.442
CKAN_01869600
OPA3-like protein.
      
 0.432
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.