STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02334100Chromosome segregation protein Spc25. (319 aa)    
Predicted Functional Partners:
CKAN_01902500
Kinetochore protein ndc80.
   
 0.999
CKAN_00435100
Kinetochore protein Nuf2-like protein.
   
 0.996
CKAN_00436100
Kinetochore protein Nuf2-like protein.
   
 0.996
CKAN_02023800
Putative kinetochore protein NUF2.
   
 0.996
CKAN_00436400
Kinetochore protein Nuf2.
   
 0.996
CKAN_02632200
Mitotic spindle checkpoint protein MAD2.
   
 
 0.977
CKAN_00100100
Mitotic spindle checkpoint protein BUBR1.
   
 0.967
CKAN_01749200
Mitotic checkpoint serine/threonine-protein kinase BUB1.
   
 0.967
CKAN_00747500
Mad3/BUB1 region 1.
   
 0.967
CKAN_01182500
Transcription factor HY5.
    
 0.952
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.