Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00450700 | CKAN_00561500 | A0A3S3MAD1 | A0A3S3NXH8 | 39S ribosomal protein L46, mitochondrial. | Pentatricopeptide repeat-containing protein. | 0.796 |
CKAN_00450700 | CKAN_00771500 | A0A3S3MAD1 | A0A3S5WGF4 | 39S ribosomal protein L46, mitochondrial. | Ribosomal protein L9. | 0.934 |
CKAN_00450700 | CKAN_00962400 | A0A3S3MAD1 | A0A443NR37 | 39S ribosomal protein L46, mitochondrial. | Ribosomal protein L4/L1e. | 0.954 |
CKAN_00450700 | CKAN_01535800 | A0A3S3MAD1 | A0A443P6R2 | 39S ribosomal protein L46, mitochondrial. | 30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family. | 0.988 |
CKAN_00450700 | CKAN_01805700 | A0A3S3MAD1 | A0A3S3NY70 | 39S ribosomal protein L46, mitochondrial. | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.986 |
CKAN_00450700 | CKAN_01819600 | A0A3S3MAD1 | A0A3S4PDY5 | 39S ribosomal protein L46, mitochondrial. | 50S ribosomal protein L21, mitochondrial-like protein isoform X1. | 0.985 |
CKAN_00450700 | CKAN_02151200 | A0A3S3MAD1 | A0A443PNJ6 | 39S ribosomal protein L46, mitochondrial. | LisH domain-containing protein ARMC9-like protein. | 0.974 |
CKAN_00450700 | CKAN_02172300 | A0A3S3MAD1 | A0A3S3PKB2 | 39S ribosomal protein L46, mitochondrial. | 50S ribosomal protein L24. | 0.944 |
CKAN_00450700 | CKAN_02339700 | A0A3S3MAD1 | A0A443PTK9 | 39S ribosomal protein L46, mitochondrial. | Uncharacterized protein. | 0.796 |
CKAN_00450700 | CKAN_02446800 | A0A3S3MAD1 | A0A3S3P7E0 | 39S ribosomal protein L46, mitochondrial. | Ribosomal protein L15. | 0.979 |
CKAN_00561500 | CKAN_00450700 | A0A3S3NXH8 | A0A3S3MAD1 | Pentatricopeptide repeat-containing protein. | 39S ribosomal protein L46, mitochondrial. | 0.796 |
CKAN_00561500 | CKAN_00771500 | A0A3S3NXH8 | A0A3S5WGF4 | Pentatricopeptide repeat-containing protein. | Ribosomal protein L9. | 0.784 |
CKAN_00561500 | CKAN_00962400 | A0A3S3NXH8 | A0A443NR37 | Pentatricopeptide repeat-containing protein. | Ribosomal protein L4/L1e. | 0.795 |
CKAN_00561500 | CKAN_01535800 | A0A3S3NXH8 | A0A443P6R2 | Pentatricopeptide repeat-containing protein. | 30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family. | 0.795 |
CKAN_00561500 | CKAN_01805700 | A0A3S3NXH8 | A0A3S3NY70 | Pentatricopeptide repeat-containing protein. | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.809 |
CKAN_00561500 | CKAN_01819600 | A0A3S3NXH8 | A0A3S4PDY5 | Pentatricopeptide repeat-containing protein. | 50S ribosomal protein L21, mitochondrial-like protein isoform X1. | 0.795 |
CKAN_00561500 | CKAN_02151200 | A0A3S3NXH8 | A0A443PNJ6 | Pentatricopeptide repeat-containing protein. | LisH domain-containing protein ARMC9-like protein. | 0.784 |
CKAN_00561500 | CKAN_02172300 | A0A3S3NXH8 | A0A3S3PKB2 | Pentatricopeptide repeat-containing protein. | 50S ribosomal protein L24. | 0.784 |
CKAN_00561500 | CKAN_02339700 | A0A3S3NXH8 | A0A443PTK9 | Pentatricopeptide repeat-containing protein. | Uncharacterized protein. | 0.795 |
CKAN_00561500 | CKAN_02446800 | A0A3S3NXH8 | A0A3S3P7E0 | Pentatricopeptide repeat-containing protein. | Ribosomal protein L15. | 0.795 |
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