Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00239100 | CKAN_00656500 | A0A3S3MHY1 | A0A3S3MZQ8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.983 |
CKAN_00239100 | CKAN_01115700 | A0A3S3MHY1 | A0A3S3N7X2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1. | 0.976 |
CKAN_00239100 | CKAN_01399700 | A0A3S3MHY1 | A0A3S4P3E9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase 4. | 0.878 |
CKAN_00239100 | CKAN_01418900 | A0A3S3MHY1 | A0A3S3MZC9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.847 |
CKAN_00239100 | CKAN_01764000 | A0A3S3MHY1 | A0A443PCV5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Phosphoribosylamine--glycine ligase isoform X1. | 0.709 |
CKAN_00239100 | CKAN_02264500 | A0A3S3MHY1 | A0A443PRK2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.965 |
CKAN_00239100 | CKAN_02325400 | A0A3S3MHY1 | A0A3S3NKK4 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Bifunctional purine biosynthesis protein PurH-like protein isoform X2. | 0.983 |
CKAN_00239100 | CKAN_02343300 | A0A3S3MHY1 | A0A443PTT8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Bifunctional protein FolD 2-like protein. | 0.903 |
CKAN_00239100 | CKAN_02416900 | A0A3S3MHY1 | A0A443PVQ2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Formyl transferase. | 0.920 |
CKAN_00239100 | CKAN_02530300 | A0A3S3MHY1 | A0A3S3R867 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Formate--tetrahydrofolate ligase. | 0.964 |
CKAN_00656500 | CKAN_00239100 | A0A3S3MZQ8 | A0A3S3MHY1 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.983 |
CKAN_00656500 | CKAN_01115700 | A0A3S3MZQ8 | A0A3S3N7X2 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1. | 0.956 |
CKAN_00656500 | CKAN_01399700 | A0A3S3MZQ8 | A0A3S4P3E9 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Serine hydroxymethyltransferase 4. | 0.981 |
CKAN_00656500 | CKAN_01418900 | A0A3S3MZQ8 | A0A3S3MZC9 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.978 |
CKAN_00656500 | CKAN_01764000 | A0A3S3MZQ8 | A0A443PCV5 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Phosphoribosylamine--glycine ligase isoform X1. | 0.793 |
CKAN_00656500 | CKAN_02264500 | A0A3S3MZQ8 | A0A443PRK2 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.999 |
CKAN_00656500 | CKAN_02325400 | A0A3S3MZQ8 | A0A3S3NKK4 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Bifunctional purine biosynthesis protein PurH-like protein isoform X2. | 0.844 |
CKAN_00656500 | CKAN_02343300 | A0A3S3MZQ8 | A0A443PTT8 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Bifunctional protein FolD 2-like protein. | 0.934 |
CKAN_00656500 | CKAN_02416900 | A0A3S3MZQ8 | A0A443PVQ2 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Formyl transferase. | 0.473 |
CKAN_00656500 | CKAN_02530300 | A0A3S3MZQ8 | A0A3S3R867 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Formate--tetrahydrofolate ligase. | 0.965 |
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