Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00405000 | CKAN_02334400 | A0A3S3PZ82 | A0A3S3N1J7 | Putative galactinol--sucrose galactosyltransferase 6 isoform X1. | Galactinol--sucrose galactosyltransferase. | 0.852 |
CKAN_00405000 | CKAN_02365500 | A0A3S3PZ82 | A0A443PUA5 | Putative galactinol--sucrose galactosyltransferase 6 isoform X1. | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | 0.791 |
CKAN_00500300 | CKAN_01436800 | A0A3S4NFJ1 | A0A443P410 | DNA-directed DNA polymerase. | DNA polymerase. | 0.784 |
CKAN_00500300 | CKAN_01761400 | A0A3S4NFJ1 | A0A3S3PDY5 | DNA-directed DNA polymerase. | DNA polymerase zeta processivity subunit isoform X2. | 0.999 |
CKAN_00500300 | CKAN_01963400 | A0A3S4NFJ1 | A0A443PIE3 | DNA-directed DNA polymerase. | DNA polymerase delta small subunit isoform X1. | 0.996 |
CKAN_00500300 | CKAN_02200600 | A0A3S4NFJ1 | A0A443PPX9 | DNA-directed DNA polymerase. | DNA polymerase. | 0.917 |
CKAN_00500300 | CKAN_02365500 | A0A3S4NFJ1 | A0A443PUA5 | DNA-directed DNA polymerase. | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | 0.852 |
CKAN_00500300 | CKAN_02657900 | A0A3S4NFJ1 | A0A3S3N7A0 | DNA-directed DNA polymerase. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.917 |
CKAN_00803200 | CKAN_02365500 | A0A3S3Q4Z5 | A0A443PUA5 | UDP-sugar pyrophosphorylase-like protein. | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | 0.752 |
CKAN_00803200 | CKAN_02579500 | A0A3S3Q4Z5 | A0A3S3P9C0 | UDP-sugar pyrophosphorylase-like protein. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.792 |
CKAN_01436800 | CKAN_00500300 | A0A443P410 | A0A3S4NFJ1 | DNA polymerase. | DNA-directed DNA polymerase. | 0.784 |
CKAN_01436800 | CKAN_01761400 | A0A443P410 | A0A3S3PDY5 | DNA polymerase. | DNA polymerase zeta processivity subunit isoform X2. | 0.974 |
CKAN_01436800 | CKAN_01963400 | A0A443P410 | A0A443PIE3 | DNA polymerase. | DNA polymerase delta small subunit isoform X1. | 0.990 |
CKAN_01436800 | CKAN_02200600 | A0A443P410 | A0A443PPX9 | DNA polymerase. | DNA polymerase. | 0.984 |
CKAN_01436800 | CKAN_02365500 | A0A443P410 | A0A443PUA5 | DNA polymerase. | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | 0.666 |
CKAN_01436800 | CKAN_02657900 | A0A443P410 | A0A3S3N7A0 | DNA polymerase. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.998 |
CKAN_01761400 | CKAN_00500300 | A0A3S3PDY5 | A0A3S4NFJ1 | DNA polymerase zeta processivity subunit isoform X2. | DNA-directed DNA polymerase. | 0.999 |
CKAN_01761400 | CKAN_01436800 | A0A3S3PDY5 | A0A443P410 | DNA polymerase zeta processivity subunit isoform X2. | DNA polymerase. | 0.974 |
CKAN_01761400 | CKAN_01963400 | A0A3S3PDY5 | A0A443PIE3 | DNA polymerase zeta processivity subunit isoform X2. | DNA polymerase delta small subunit isoform X1. | 0.964 |
CKAN_01761400 | CKAN_02200600 | A0A3S3PDY5 | A0A443PPX9 | DNA polymerase zeta processivity subunit isoform X2. | DNA polymerase. | 0.978 |
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