STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02375800Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (344 aa)    
Predicted Functional Partners:
CKAN_01769600
Tetrahydrocannabinolic acid synthase-like protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
   
  0.666
CKAN_01167600
Caffeic acid 3-O-methyltransferase-like protein isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
   
 
  0.640
CKAN_01542800
Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
   
 
  0.628
CKAN_02307400
E3 ubiquitin-protein ligase KEG isoform X2.
   
 0.586
CKAN_01845700
Ankyrin-1 isoform X1.
   
  0.553
CKAN_02704200
E3 ubiquitin-protein ligase PRT1-like protein.
    
 0.549
CKAN_00656000
Putative cinnamyl alcohol dehydrogenase 1.
    
  0.525
CKAN_01171800
Putative cinnamyl alcohol dehydrogenase 1.
    
  0.525
CKAN_01285900
Outer envelope protein 64, mitochondrial.
    
 0.477
CKAN_01202100
Translocon at the outer membrane of chloroplasts 64.
    
 0.477
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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