STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02397600Cullin-1; Belongs to the cullin family. (744 aa)    
Predicted Functional Partners:
CKAN_02704200
E3 ubiquitin-protein ligase PRT1-like protein.
    
 0.994
CKAN_01937000
Cullin-associated NEDD8-dissociated protein 1 isoform X1.
   
 0.953
CKAN_00806400
RING-box protein 1a.
    
 0.941
CKAN_00524300
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.933
CKAN_02523800
RING-box protein 1a-like protein.
    
 0.933
CKAN_02504900
COP9 signalosome complex subunit 4.
   
 0.924
CKAN_00832100
COP9 signalosome complex subunit 2.
   
 0.921
CKAN_01156200
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 0.919
CKAN_00054900
NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.917
CKAN_00258900
NEDD8-conjugating enzyme Ubc12 isoform X2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.917
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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