STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02440100Biotin--protein ligase 2 isoform X1. (70 aa)    
Predicted Functional Partners:
CKAN_00015900
Biotin synthase.
  
 
 0.940
CKAN_00030500
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.898
CKAN_01766900
Phosphopantothenate--cysteine ligase 2-like protein.
  
 
 0.898
CKAN_01894600
Acetyl-CoA carboxylase 1-like protein.
  
 0.885
CKAN_02527500
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein.
    
 0.838
CKAN_00354000
Omega-amidase, chloroplastic isoform X1.
    
 0.838
CKAN_00761200
N-carbamoylputrescine amidase.
    
 0.838
CKAN_01930100
2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial isoform X1.
     
 0.815
CKAN_02528700
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.815
CKAN_01091300
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
    
 0.815
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.