STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02455600Protein EFR3 A-like protein isoform X2. (991 aa)    
Predicted Functional Partners:
CKAN_00916300
Phosphatidylinositol 4-kinase alpha 1-like protein isoform X1; Belongs to the PI3/PI4-kinase family.
  
 
 0.823
CKAN_00646600
Tetratricopeptide repeat protein 7A.
   
 
 0.653
CKAN_00985400
Tetratricopeptide repeat protein 7A-like protein.
   
 
 0.604
CKAN_02596700
Tetratricopeptide repeat protein 7A-like protein.
   
 
 0.604
CKAN_01115800
Tetratricopeptide repeat protein 7A-like protein.
   
 
 0.551
CKAN_02366400
Tetratricopeptide repeat protein 7A-like protein.
   
 
 0.551
CKAN_02382300
Tetratricopeptide repeat.
   
 
 0.551
CKAN_01818800
DNA helicase; Belongs to the MCM family.
   
 
  0.535
CKAN_00537100
Mini-chromosome maintenance; Belongs to the MCM family.
   
 
  0.535
CKAN_00033200
Wings apart-like protein.
  
    0.526
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (26%) [HD]