STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02472500Villin-2. (1016 aa)    
Predicted Functional Partners:
CKAN_00708500
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.820
CKAN_00135200
Conserved oligomeric Golgi complex subunit 3 isoform X1.
    
 
 0.817
CKAN_01861600
Conserved oligomeric Golgi complex subunit 4.
    
 
 0.813
CKAN_00866700
Conserved oligomeric Golgi complex subunit 8.
    
 
 0.736
CKAN_00866800
Conserved oligomeric Golgi complex subunit 8.
    
 
 0.736
CKAN_02256700
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 
 0.736
CKAN_00102600
Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.616
CKAN_00318500
Guanylate kinase 2, chloroplastic/mitochondrial.
    
 0.498
CKAN_01155600
Guanylate kinase 2-like protein.
    
 0.498
CKAN_01174100
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.433
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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