STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02491400EF-hand domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (832 aa)    
Predicted Functional Partners:
CKAN_01944800
AAA+ ATPase domain-containing protein.
      
 0.440
CKAN_00917700
Abhydrolase domain-containing protein cgi-58.
      
 0.433
CKAN_01230000
Iron-sulfur cluster biosynthesis family protein.
      
 0.433
CKAN_02215600
Localized to the inner membrane of the chloroplast.
      
 0.433
CKAN_02531400
Uncharacterized protein.
      
 0.433
CKAN_01941600
Thymidylate synthase.
      
 0.432
CKAN_01349600
Uncharacterized protein.
      
 0.428
CKAN_00760500
Protein FATTY ACID EXPORT 3, chloroplastic.
      
 0.426
CKAN_01275700
Protein SPA1-RELATED 4-like protein.
      
 0.426
CKAN_02131600
Serrate RNA effector molecule isoform X1.
  
     0.415
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.