STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02525800LRR receptor-like serine/threonine-protein kinase ERECTA isoform X2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (986 aa)    
Predicted Functional Partners:
CKAN_01330500
Protein EPIDERMAL PATTERNING FACTOR 1-like protein.
    
 0.950
CKAN_01982300
Protein EPIDERMAL PATTERNING FACTOR 1-like protein.
    
 0.950
CKAN_01893200
Protein EPIDERMAL PATTERNING FACTOR 2-like protein.
    
 0.917
CKAN_02228500
Protein EPIDERMAL PATTERNING FACTOR 2-like protein isoform X4.
    
 0.917
CKAN_01283600
Protein EPIDERMAL PATTERNING FACTOR 2-like protein.
    
 0.917
CKAN_00405700
Leucine rich repeat 4.
  
 
0.818
CKAN_00042300
Protein kinase domain-containing protein.
    
0.807
CKAN_02086600
Mitogen-activated protein kinase kinase kinase YODA-like protein.
    
0.807
CKAN_02237700
EPIDERMAL PATTERNING FACTOR-like protein 5.
    
 
 0.787
CKAN_02287400
Engulfment/cell motility.
    
  0.593
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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