STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02539800Ammonium transporter. (511 aa)    
Predicted Functional Partners:
CKAN_02382000
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.983
CKAN_01392900
Cardiolipin synthase CMP-forming, mitochondrial; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
  0.648
CKAN_01928600
Phosphatidylserine decarboxylase proenzyme 2 isoform X2.
     
 0.608
CKAN_00067200
Bifunctional phosphatase IMPL2, chloroplastic-like protein.
    
  0.593
CKAN_01459400
Inositol-1-monophosphatase.
    
  0.593
CKAN_02295400
Glutamine synthetase.
  
  
 0.438
CKAN_02218100
Phosphoinositide phosphatase SAC6 isoform X1.
    
  0.428
CKAN_00703600
Phosphoinositide phosphatase SAC6 isoform X1.
    
  0.428
CKAN_02309800
Amidohydrolase 2; Belongs to the glutamine synthetase family.
  
  
 0.428
CKAN_02158800
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.427
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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