STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02537800Glycosyltransferase AER61. (508 aa)    
Predicted Functional Partners:
CKAN_00108100
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like protein.
     
 0.934
CKAN_01916800
Glycoprotein 3-alpha-L-fucosyltransferase A-like protein.
   
 
 0.929
CKAN_02177800
Glycoprotein 3-alpha-L-fucosyltransferase A-like protein.
   
 
 0.929
CKAN_00052300
Alpha-1,4-fucosyltransferase.
     
 0.686
CKAN_00452000
Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY.
     
 0.650
CKAN_02234900
Beta-1,3-galactosyltransferase GALT1-like protein isoform X1.
   
 
 0.592
CKAN_00691100
Beta-1,3-galactosyltransferase GALT1-like protein isoform X1.
   
 
 0.592
CKAN_00412400
Alpha-mannosidase.
    
 
 0.571
CKAN_01530400
Stromal cell-derived factor 2-like protein.
     
 0.547
CKAN_02027300
Stromal cell-derived factor 2-like protein.
     
 0.547
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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