STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02598600Ribonuclease P protein subunit p25-like protein isoform X1. (291 aa)    
Predicted Functional Partners:
CKAN_00533700
Uncharacterized protein.
    
 0.955
CKAN_01878800
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.954
CKAN_02456500
Ribonuclease P/MRP.
    
 0.939
CKAN_01515300
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.823
CKAN_00482900
Ribosomal protein L7Ae/L30e/S12e/Gadd45.
   
 0.823
CKAN_01776000
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.823
CKAN_01282300
40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.670
CKAN_02626600
Receptor protein kinase-like protein ZAR1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
   
 
 0.648
CKAN_01257600
Receptor protein kinase-like protein ZAR1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
   
 
 0.648
CKAN_01212700
Ribosomal protein S4/S9.
   
 
  0.639
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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